Cluster: HRGMv2_3704_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3704
- CGC Family ID: CGCFAM_00077
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3704_32 | HRGMv2_3704_32_38 | 38778 | 39995 | - | 3.A.1.122.2 |
| TC | HRGMv2_3704_32 | HRGMv2_3704_32_39 | 39985 | 40689 | - | 3.A.1.122.2 |
| pfam | HRGMv2_3704_32 | HRGMv2_3704_32_40 | 40704 | 41840 | - | OEP | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| TC | HRGMv2_3704_32 | HRGMv2_3704_32_41 | 42080 | 43243 | + | 2.A.39.1.3 |
| NULL(UNKNOWN) | HRGMv2_3704_32 | HRGMv2_3704_32_42 | 43379 | 43582 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3704_32 | HRGMv2_3704_32_43 | 44143 | 46221 | - | GT51 |
| TC | HRGMv2_3704_32 | HRGMv2_3704_32_44 | 46547 | 48955 | + | 8.A.7.1.5 |
Gene ID: HRGMv2_3704_32_38
Type: TC
Location: 38778 - 39995 (-)
Type: TC
Location: 38778 - 39995 (-)
Gene ID: HRGMv2_3704_32_39
Type: TC
Location: 39985 - 40689 (-)
Type: TC
Location: 39985 - 40689 (-)
Gene ID: HRGMv2_3704_32_40
Type: pfam
Location: 40704 - 41840 (-)
Type: pfam
Location: 40704 - 41840 (-)
Gene ID: HRGMv2_3704_32_41
Type: TC
Location: 42080 - 43243 (+)
Type: TC
Location: 42080 - 43243 (+)
Gene ID: HRGMv2_3704_32_42
Type:
Location: 43379 - 43582 (+)
Type:
Location: 43379 - 43582 (+)
Gene ID: HRGMv2_3704_32_43
Type: CAZyme
Location: 44143 - 46221 (-)
Type: CAZyme
Location: 44143 - 46221 (-)
Gene ID: HRGMv2_3704_32_44
Type: TC
Location: 46547 - 48955 (+)
Type: TC
Location: 46547 - 48955 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp002319965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.