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Cluster: HRGMv2_3704_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3704_32 HRGMv2_3704_32_50 54739 55470 + GT26
pfam HRGMv2_3704_32 HRGMv2_3704_32_51 55485 56138 + PS_Dcarbxylase
pfam HRGMv2_3704_32 HRGMv2_3704_32_52 56135 56806 + CDP-OH_P_transf
CAZyme HRGMv2_3704_32 HRGMv2_3704_32_53 56827 58077 + GT2
pfam HRGMv2_3704_32 HRGMv2_3704_32_54 58089 58850 + SurE
pfam HRGMv2_3704_32 HRGMv2_3704_32_55 58847 59239 + dCMP_cyt_deam_1 | dCMP_cyt_deam_2
TC HRGMv2_3704_32 HRGMv2_3704_32_56 59604 60989 + 2.A.25.1.4
pfam HRGMv2_3704_32 HRGMv2_3704_32_57 61383 62339 - Abi_2
STP HRGMv2_3704_32 HRGMv2_3704_32_58 62748 63251 + Nitroreductase | Nitroreductase
TC HRGMv2_3704_32 HRGMv2_3704_32_59 63329 64024 + 2.A.64.2.1
TC HRGMv2_3704_32 HRGMv2_3704_32_60 64208 67642 + 3.B.1.1.1
pfam HRGMv2_3704_32 HRGMv2_3704_32_61 67718 68389 + Fer2 | Fer2_4
TC HRGMv2_3704_32 HRGMv2_3704_32_62 68399 70009 + 3.D.10.1.2
TC HRGMv2_3704_32 HRGMv2_3704_32_63 70015 71223 - 2.A.1.2.20
TC HRGMv2_3704_32 HRGMv2_3704_32_64 71370 72302 + 3.A.1.5.2
TC HRGMv2_3704_32 HRGMv2_3704_32_65 72305 73210 + 3.A.1.5.2
TC HRGMv2_3704_32 HRGMv2_3704_32_66 73207 74202 + 3.A.1.5.2
TC HRGMv2_3704_32 HRGMv2_3704_32_67 74189 75157 + 3.A.1.5.20
TC HRGMv2_3704_32 HRGMv2_3704_32_68 75157 76746 + 3.A.1.5.2
Gene ID: HRGMv2_3704_32_50
Type: CAZyme
Location: 54739 - 55470 (+)
Gene ID: HRGMv2_3704_32_51
Type: pfam
Location: 55485 - 56138 (+)
Gene ID: HRGMv2_3704_32_52
Type: pfam
Location: 56135 - 56806 (+)
Gene ID: HRGMv2_3704_32_53
Type: CAZyme
Location: 56827 - 58077 (+)
Gene ID: HRGMv2_3704_32_54
Type: pfam
Location: 58089 - 58850 (+)
Gene ID: HRGMv2_3704_32_55
Type: pfam
Location: 58847 - 59239 (+)
Gene ID: HRGMv2_3704_32_56
Type: TC
Location: 59604 - 60989 (+)
Gene ID: HRGMv2_3704_32_57
Type: pfam
Location: 61383 - 62339 (-)
Gene ID: HRGMv2_3704_32_58
Type: STP
Location: 62748 - 63251 (+)
Gene ID: HRGMv2_3704_32_59
Type: TC
Location: 63329 - 64024 (+)
Gene ID: HRGMv2_3704_32_60
Type: TC
Location: 64208 - 67642 (+)
Gene ID: HRGMv2_3704_32_61
Type: pfam
Location: 67718 - 68389 (+)
Gene ID: HRGMv2_3704_32_62
Type: TC
Location: 68399 - 70009 (+)
Gene ID: HRGMv2_3704_32_63
Type: TC
Location: 70015 - 71223 (-)
Gene ID: HRGMv2_3704_32_64
Type: TC
Location: 71370 - 72302 (+)
Gene ID: HRGMv2_3704_32_65
Type: TC
Location: 72305 - 73210 (+)
Gene ID: HRGMv2_3704_32_66
Type: TC
Location: 73207 - 74202 (+)
Gene ID: HRGMv2_3704_32_67
Type: TC
Location: 74189 - 75157 (+)
Gene ID: HRGMv2_3704_32_68
Type: TC
Location: 75157 - 76746 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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