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Cluster: HRGMv2_3704_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3704_23 HRGMv2_3704_23_44 55097 57259 - 3.A.7.16.1
pfam HRGMv2_3704_23 HRGMv2_3704_23_45 57256 57528 - CM_2
TC HRGMv2_3704_23 HRGMv2_3704_23_46 57735 59189 + 2.A.3.1.2
NULL(UNKNOWN) HRGMv2_3704_23 HRGMv2_3704_23_47 59655 60890 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3704_23 HRGMv2_3704_23_48 60998 62104 - Oxidored_FMN
TC HRGMv2_3704_23 HRGMv2_3704_23_49 62417 66088 - 1.B.12.2.6
TC HRGMv2_3704_23 HRGMv2_3704_23_50 66353 69412 - 1.B.12.4.3
NULL(UNKNOWN) HRGMv2_3704_23 HRGMv2_3704_23_51 70018 70725 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3704_23 HRGMv2_3704_23_52 70730 71452 - QueH
TC HRGMv2_3704_23 HRGMv2_3704_23_53 71851 72855 + 3.A.1.23.1
pfam HRGMv2_3704_23 HRGMv2_3704_23_54 72868 73677 + CbiQ
TC HRGMv2_3704_23 HRGMv2_3704_23_55 73674 74321 + 3.A.1.23.7
CAZyme HRGMv2_3704_23 HRGMv2_3704_23_56 74338 75540 - GH73
pfam HRGMv2_3704_23 HRGMv2_3704_23_57 75530 75931 - CGGC
pfam HRGMv2_3704_23 HRGMv2_3704_23_58 75946 76620 - CpXC
TC HRGMv2_3704_23 HRGMv2_3704_23_59 76721 77041 - 2.A.7.1.10
Gene ID: HRGMv2_3704_23_44
Type: TC
Location: 55097 - 57259 (-)
Gene ID: HRGMv2_3704_23_45
Type: pfam
Location: 57256 - 57528 (-)
Gene ID: HRGMv2_3704_23_46
Type: TC
Location: 57735 - 59189 (+)
Gene ID: HRGMv2_3704_23_47
Type:
Location: 59655 - 60890 (+)
Gene ID: HRGMv2_3704_23_48
Type: pfam
Location: 60998 - 62104 (-)
Gene ID: HRGMv2_3704_23_49
Type: TC
Location: 62417 - 66088 (-)
Gene ID: HRGMv2_3704_23_50
Type: TC
Location: 66353 - 69412 (-)
Gene ID: HRGMv2_3704_23_51
Type:
Location: 70018 - 70725 (-)
Gene ID: HRGMv2_3704_23_52
Type: pfam
Location: 70730 - 71452 (-)
Gene ID: HRGMv2_3704_23_53
Type: TC
Location: 71851 - 72855 (+)
Gene ID: HRGMv2_3704_23_54
Type: pfam
Location: 72868 - 73677 (+)
Gene ID: HRGMv2_3704_23_55
Type: TC
Location: 73674 - 74321 (+)
Gene ID: HRGMv2_3704_23_56
Type: CAZyme
Location: 74338 - 75540 (-)
Gene ID: HRGMv2_3704_23_57
Type: pfam
Location: 75530 - 75931 (-)
Gene ID: HRGMv2_3704_23_58
Type: pfam
Location: 75946 - 76620 (-)
Gene ID: HRGMv2_3704_23_59
Type: TC
Location: 76721 - 77041 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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