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Cluster: HRGMv2_3704_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3704_11 HRGMv2_3704_11_4 2392 3375 - GT2
CAZyme HRGMv2_3704_11 HRGMv2_3704_11_5 3620 4981 - GT4
CAZyme HRGMv2_3704_11 HRGMv2_3704_11_6 5090 6028 - GT2
CAZyme HRGMv2_3704_11 HRGMv2_3704_11_7 6045 7118 - GT4
CAZyme HRGMv2_3704_11 HRGMv2_3704_11_8 7166 8119 - GT2
CAZyme HRGMv2_3704_11 HRGMv2_3704_11_9 8112 9221 - GT4
TC HRGMv2_3704_11 HRGMv2_3704_11_10 9340 10773 - 9.B.18.1.2
Gene ID: HRGMv2_3704_11_4
Type: CAZyme
Location: 2392 - 3375 (-)
Gene ID: HRGMv2_3704_11_5
Type: CAZyme
Location: 3620 - 4981 (-)
Gene ID: HRGMv2_3704_11_6
Type: CAZyme
Location: 5090 - 6028 (-)
Gene ID: HRGMv2_3704_11_7
Type: CAZyme
Location: 6045 - 7118 (-)
Gene ID: HRGMv2_3704_11_8
Type: CAZyme
Location: 7166 - 8119 (-)
Gene ID: HRGMv2_3704_11_9
Type: CAZyme
Location: 8112 - 9221 (-)
Gene ID: HRGMv2_3704_11_10
Type: TC
Location: 9340 - 10773 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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