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Cluster: HRGMv2_3704_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3704_27 HRGMv2_3704_27_28 26853 27371 + 2.A.87.3.1
NULL(UNKNOWN) HRGMv2_3704_27 HRGMv2_3704_27_29 27392 27994 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3704_27 HRGMv2_3704_27_30 28049 28717 - RNase_T
TC HRGMv2_3704_27 HRGMv2_3704_27_31 28854 29678 - 3.A.1.24.1
TC HRGMv2_3704_27 HRGMv2_3704_27_32 30141 31280 + 2.A.1.60.3
CAZyme HRGMv2_3704_27 HRGMv2_3704_27_33 31355 32755 - AA4
NULL(UNKNOWN) HRGMv2_3704_27 HRGMv2_3704_27_34 32822 33250 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3704_27 HRGMv2_3704_27_35 33263 34612 - 2.A.1.3.70
pfam HRGMv2_3704_27 HRGMv2_3704_27_36 34814 35584 + adh_short | KR | adh_short_C2
pfam HRGMv2_3704_27 HRGMv2_3704_27_37 35954 36946 + URO-D
TC HRGMv2_3704_27 HRGMv2_3704_27_38 36967 37839 + 3.A.1.3.13
TC HRGMv2_3704_27 HRGMv2_3704_27_39 37860 38591 + 3.A.1.3.13
TC HRGMv2_3704_27 HRGMv2_3704_27_40 38592 39296 + 3.A.1.3.13
TC HRGMv2_3704_27 HRGMv2_3704_27_41 39310 40077 + 3.A.1.3.13
pfam HRGMv2_3704_27 HRGMv2_3704_27_42 40175 40903 - Hydrolase | HAD | Hydrolase_like | HAD_2
TC HRGMv2_3704_27 HRGMv2_3704_27_43 40960 41886 - 3.A.1.15.11
TC HRGMv2_3704_27 HRGMv2_3704_27_44 42019 42687 + 3.A.1.15.11
TC HRGMv2_3704_27 HRGMv2_3704_27_45 42687 43505 + 3.A.1.15.7
Gene ID: HRGMv2_3704_27_28
Type: TC
Location: 26853 - 27371 (+)
Gene ID: HRGMv2_3704_27_29
Type:
Location: 27392 - 27994 (-)
Gene ID: HRGMv2_3704_27_30
Type: pfam
Location: 28049 - 28717 (-)
Gene ID: HRGMv2_3704_27_31
Type: TC
Location: 28854 - 29678 (-)
Gene ID: HRGMv2_3704_27_32
Type: TC
Location: 30141 - 31280 (+)
Gene ID: HRGMv2_3704_27_33
Type: CAZyme
Location: 31355 - 32755 (-)
Gene ID: HRGMv2_3704_27_34
Type:
Location: 32822 - 33250 (-)
Gene ID: HRGMv2_3704_27_35
Type: TC
Location: 33263 - 34612 (-)
Gene ID: HRGMv2_3704_27_36
Type: pfam
Location: 34814 - 35584 (+)
Gene ID: HRGMv2_3704_27_37
Type: pfam
Location: 35954 - 36946 (+)
Gene ID: HRGMv2_3704_27_38
Type: TC
Location: 36967 - 37839 (+)
Gene ID: HRGMv2_3704_27_39
Type: TC
Location: 37860 - 38591 (+)
Gene ID: HRGMv2_3704_27_40
Type: TC
Location: 38592 - 39296 (+)
Gene ID: HRGMv2_3704_27_41
Type: TC
Location: 39310 - 40077 (+)
Gene ID: HRGMv2_3704_27_42
Type: pfam
Location: 40175 - 40903 (-)
Gene ID: HRGMv2_3704_27_43
Type: TC
Location: 40960 - 41886 (-)
Gene ID: HRGMv2_3704_27_44
Type: TC
Location: 42019 - 42687 (+)
Gene ID: HRGMv2_3704_27_45
Type: TC
Location: 42687 - 43505 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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