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Cluster: HRGMv2_3704_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3704_24 HRGMv2_3704_24_74 81987 83000 + 2.A.28.2.4
TC HRGMv2_3704_24 HRGMv2_3704_24_75 83104 83781 + 9.B.120.1.4
pfam HRGMv2_3704_24 HRGMv2_3704_24_76 83845 84420 + UDG
TC HRGMv2_3704_24 HRGMv2_3704_24_77 84901 85896 + 2.A.28.2.4
NULL(UNKNOWN) HRGMv2_3704_24 HRGMv2_3704_24_78 86023 86199 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3704_24 HRGMv2_3704_24_79 86848 87849 + 2.A.28.2.4
NULL(UNKNOWN) HRGMv2_3704_24 HRGMv2_3704_24_80 87987 88613 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3704_24 HRGMv2_3704_24_81 88633 89520 - Radical_SAM
TC HRGMv2_3704_24 HRGMv2_3704_24_82 89592 90500 - 2.A.7.3.31
STP HRGMv2_3704_24 HRGMv2_3704_24_83 90636 95198 - GATase_2
pfam HRGMv2_3704_24 HRGMv2_3704_24_84 95387 96067 - UDG
CAZyme HRGMv2_3704_24 HRGMv2_3704_24_85 96083 97693 - GT83
CAZyme HRGMv2_3704_24 HRGMv2_3704_24_86 97703 99262 - GT83
TC HRGMv2_3704_24 HRGMv2_3704_24_87 99259 99852 - 9.B.27.2.5
NULL(UNKNOWN) HRGMv2_3704_24 HRGMv2_3704_24_88 99940 100896 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3704_24 HRGMv2_3704_24_89 101332 102051 + 9.B.20.1.4
Gene ID: HRGMv2_3704_24_74
Type: TC
Location: 81987 - 83000 (+)
Gene ID: HRGMv2_3704_24_75
Type: TC
Location: 83104 - 83781 (+)
Gene ID: HRGMv2_3704_24_76
Type: pfam
Location: 83845 - 84420 (+)
Gene ID: HRGMv2_3704_24_77
Type: TC
Location: 84901 - 85896 (+)
Gene ID: HRGMv2_3704_24_78
Type:
Location: 86023 - 86199 (+)
Gene ID: HRGMv2_3704_24_79
Type: TC
Location: 86848 - 87849 (+)
Gene ID: HRGMv2_3704_24_80
Type:
Location: 87987 - 88613 (-)
Gene ID: HRGMv2_3704_24_81
Type: pfam
Location: 88633 - 89520 (-)
Gene ID: HRGMv2_3704_24_82
Type: TC
Location: 89592 - 90500 (-)
Gene ID: HRGMv2_3704_24_83
Type: STP
Location: 90636 - 95198 (-)
Gene ID: HRGMv2_3704_24_84
Type: pfam
Location: 95387 - 96067 (-)
Gene ID: HRGMv2_3704_24_85
Type: CAZyme
Location: 96083 - 97693 (-)
Gene ID: HRGMv2_3704_24_86
Type: CAZyme
Location: 97703 - 99262 (-)
Gene ID: HRGMv2_3704_24_87
Type: TC
Location: 99259 - 99852 (-)
Gene ID: HRGMv2_3704_24_88
Type:
Location: 99940 - 100896 (-)
Gene ID: HRGMv2_3704_24_89
Type: TC
Location: 101332 - 102051 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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