Cluster: HRGMv2_3704_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3704
- CGC Family ID: CGCFAM_01389
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3704_13 | HRGMv2_3704_13_1 | 325 | 2202 | + | 2.A.114.1.5 |
| TC | HRGMv2_3704_13 | HRGMv2_3704_13_2 | 2650 | 4527 | + | 2.A.114.1.5 |
| NULL(UNKNOWN) | HRGMv2_3704_13 | HRGMv2_3704_13_3 | 4635 | 5534 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3704_13 | HRGMv2_3704_13_4 | 5544 | 6941 | - | AA4 |
Gene ID: HRGMv2_3704_13_1
Type: TC
Location: 325 - 2202 (+)
Type: TC
Location: 325 - 2202 (+)
Gene ID: HRGMv2_3704_13_2
Type: TC
Location: 2650 - 4527 (+)
Type: TC
Location: 2650 - 4527 (+)
Gene ID: HRGMv2_3704_13_3
Type:
Location: 4635 - 5534 (-)
Type:
Location: 4635 - 5534 (-)
Gene ID: HRGMv2_3704_13_4
Type: CAZyme
Location: 5544 - 6941 (-)
Type: CAZyme
Location: 5544 - 6941 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp002319965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.