Genome Details
Selected Rep_genome_ID: HRGMv2_3649
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3649 | 2,707,421 | 100% | 0% | Tanzania | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3649_CGC29 | CGCFAM_00115 | Yes | 3 | 2 | |
| HRGMv2_3649_CGC9 | CGCFAM_00424 | Yes | 5 | 2 | |
| HRGMv2_3649_CGC28 | CGCFAM_00968 | Yes | 7 | 3 | |
| HRGMv2_3649_CGC21 | CGCFAM_01430 | Yes | 4 | 2 | |
| HRGMv2_3649_CGC2 | CGCFAM_01794 | Yes | 13 | 2 | |
| HRGMv2_3649_CGC17 | CGCFAM_05906 | Yes | 6 | 2 | |
| HRGMv2_3649_CGC11 | CGCFAM_06515 | Yes | 10 | 4 | |
| HRGMv2_3649_CGC8 | CGCFAM_10411 | Yes | 10 | 5 |
Top CAZyme Families