Cluster: HRGMv2_3649_CGC29
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3649
- CGC Family ID: CGCFAM_00115
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3649_78 | HRGMv2_3649_78_1 | 2 | 841 | - | 9.B.183.1.5 |
| CAZyme | HRGMv2_3649_78 | HRGMv2_3649_78_2 | 828 | 1928 | - | GT4 |
| CAZyme | HRGMv2_3649_78 | HRGMv2_3649_78_3 | 1940 | 2878 | - | CE4 |
Gene ID: HRGMv2_3649_78_1
Type: TC
Location: 2 - 841 (-)
Type: TC
Location: 2 - 841 (-)
Gene ID: HRGMv2_3649_78_2
Type: CAZyme
Location: 828 - 1928 (-)
Type: CAZyme
Location: 828 - 1928 (-)
Gene ID: HRGMv2_3649_78_3
Type: CAZyme
Location: 1940 - 2878 (-)
Type: CAZyme
Location: 1940 - 2878 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.