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Cluster: HRGMv2_3649_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3649_26 HRGMv2_3649_26_2 166 1347 + 9.A.25.1.1
TC HRGMv2_3649_26 HRGMv2_3649_26_3 1704 2021 + 2.A.40.7.6
TC HRGMv2_3649_26 HRGMv2_3649_26_4 2018 2932 + 2.A.40.7.2
TC HRGMv2_3649_26 HRGMv2_3649_26_5 3053 3550 + 3.A.11.1.4
CAZyme HRGMv2_3649_26 HRGMv2_3649_26_6 3728 5725 - GH31_1
CAZyme HRGMv2_3649_26 HRGMv2_3649_26_7 5904 7304 - GH13_28
Gene ID: HRGMv2_3649_26_2
Type: TC
Location: 166 - 1347 (+)
Gene ID: HRGMv2_3649_26_3
Type: TC
Location: 1704 - 2021 (+)
Gene ID: HRGMv2_3649_26_4
Type: TC
Location: 2018 - 2932 (+)
Gene ID: HRGMv2_3649_26_5
Type: TC
Location: 3053 - 3550 (+)
Gene ID: HRGMv2_3649_26_6
Type: CAZyme
Location: 3728 - 5725 (-)
Gene ID: HRGMv2_3649_26_7
Type: CAZyme
Location: 5904 - 7304 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Spirochaetota
→
Class
Spirochaetia
→
Order
Treponematales
→
Family
Treponemataceae
→
Genus
Treponema_D
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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