Genome Details
Selected Rep_genome_ID: HRGMv2_3440
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
RFN20
Family
CAG-288
Genus
CAG-345
Species
CAG-345 sp000433315
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG019_maxbin.022 | 1,768,675 | 97.75% | 0% | NA | Africa | H3AfricaPhase2 |
| CGMR031998 | 1,683,854 | 97.75% | 0% | China | Asia | CGMR |
| GCA_021622505.1_ASM2162250v1_genomic | 1,882,493 | 97.75% | 1.12% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_3440 | 1,873,721 | 97.75% | 0% | UK | Europe | HRGM |
| MGYG000004498 | 1,649,118 | 97.75% | 0% | Israel | Asia | UHGG |
| ShaoY_2019_ERR3405926_bin.6 | 1,671,029 | 96.62% | 0% | UK | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3440_CGC16 | CGCFAM_00117 | Yes | 4 | 1 | alpha-glucan |
| HRGMv2_3440_CGC3 | CGCFAM_00339 | Yes | 5 | 2 | |
| HRGMv2_3440_CGC14 | CGCFAM_00449 | Yes | 8 | 1 | |
| HRGMv2_3440_CGC2 | CGCFAM_00481 | Yes | 3 | 1 | fructan |
| HRGMv2_3440_CGC9 | CGCFAM_00731 | Yes | 4 | 1 | |
| HRGMv2_3440_CGC13 | CGCFAM_02558 | Yes | 5 | 2 | |
| HRGMv2_3440_CGC6 | CGCFAM_03160 | Yes | 9 | 4 | |
| HRGMv2_3440_CGC10 | CGCFAM_03257 | Yes | 4 | 1 | |
| HRGMv2_3440_CGC5 | CGCFAM_05439 | Yes | 3 | 1 |
Top CAZyme Families