Cluster: HRGMv2_3440_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3440
- CGC Family ID: CGCFAM_00339
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3440_1 | HRGMv2_3440_1_99 | 112905 | 114875 | - | GH51_1 |
| CAZyme | HRGMv2_3440_1 | HRGMv2_3440_1_100 | 114879 | 116546 | - | GH2 |
| TC | HRGMv2_3440_1 | HRGMv2_3440_1_101 | 116548 | 117390 | - | 3.A.1.1.36 |
| TC | HRGMv2_3440_1 | HRGMv2_3440_1_102 | 117383 | 118294 | - | 3.A.1.1.21 |
| TC | HRGMv2_3440_1 | HRGMv2_3440_1_103 | 118296 | 119618 | - | 3.A.1.1.2 |
Gene ID: HRGMv2_3440_1_99
Type: CAZyme
Location: 112905 - 114875 (-)
Type: CAZyme
Location: 112905 - 114875 (-)
Gene ID: HRGMv2_3440_1_100
Type: CAZyme
Location: 114879 - 116546 (-)
Type: CAZyme
Location: 114879 - 116546 (-)
Gene ID: HRGMv2_3440_1_101
Type: TC
Location: 116548 - 117390 (-)
Type: TC
Location: 116548 - 117390 (-)
Gene ID: HRGMv2_3440_1_102
Type: TC
Location: 117383 - 118294 (-)
Type: TC
Location: 117383 - 118294 (-)
Gene ID: HRGMv2_3440_1_103
Type: TC
Location: 118296 - 119618 (-)
Type: TC
Location: 118296 - 119618 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-288
Genus
CAG-345
Species
CAG-345 sp000433315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.