Cluster: HRGMv2_3440_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3440
- CGC Family ID: CGCFAM_05439
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3440_1 | HRGMv2_3440_1_457 | 509974 | 511086 | + | 3.A.1.1.22 |
| pfam | HRGMv2_3440_1 | HRGMv2_3440_1_458 | 511141 | 512787 | - | Flg_new_2 |
| CAZyme | HRGMv2_3440_1 | HRGMv2_3440_1_459 | 513175 | 515136 | + | GH3 |
Gene ID: HRGMv2_3440_1_457
Type: TC
Location: 509974 - 511086 (+)
Type: TC
Location: 509974 - 511086 (+)
Gene ID: HRGMv2_3440_1_458
Type: pfam
Location: 511141 - 512787 (-)
Type: pfam
Location: 511141 - 512787 (-)
Gene ID: HRGMv2_3440_1_459
Type: CAZyme
Location: 513175 - 515136 (+)
Type: CAZyme
Location: 513175 - 515136 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-288
Genus
CAG-345
Species
CAG-345 sp000433315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.