Cluster: HRGMv2_3440_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3440
- CGC Family ID: CGCFAM_00731
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3440_2 | HRGMv2_3440_2_375 | 426478 | 427431 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3440_2 | HRGMv2_3440_2_376 | 427432 | 427695 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3440_2 | HRGMv2_3440_2_377 | 427742 | 430429 | - | 3.A.3.2.21 |
| TC | HRGMv2_3440_2 | HRGMv2_3440_2_378 | 430744 | 431742 | + | 3.A.1.141.1 |
Gene ID: HRGMv2_3440_2_375
Type: CAZyme
Location: 426478 - 427431 (+)
Type: CAZyme
Location: 426478 - 427431 (+)
Gene ID: HRGMv2_3440_2_376
Type:
Location: 427432 - 427695 (-)
Type:
Location: 427432 - 427695 (-)
Gene ID: HRGMv2_3440_2_377
Type: TC
Location: 427742 - 430429 (-)
Type: TC
Location: 427742 - 430429 (-)
Gene ID: HRGMv2_3440_2_378
Type: TC
Location: 430744 - 431742 (+)
Type: TC
Location: 430744 - 431742 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-288
Genus
CAG-345
Species
CAG-345 sp000433315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.