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Cluster: HRGMv2_3440_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3440_5 HRGMv2_3440_5_79 90615 91496 + 3.A.1.15.1
TC HRGMv2_3440_5 HRGMv2_3440_5_80 91480 92118 + 3.A.1.32.2
TC HRGMv2_3440_5 HRGMv2_3440_5_81 92111 92950 + 3.A.1.15.3
pfam HRGMv2_3440_5 HRGMv2_3440_5_82 93041 93856 - MurB_C
CAZyme HRGMv2_3440_5 HRGMv2_3440_5_83 93846 94670 - GT28
TC HRGMv2_3440_5 HRGMv2_3440_5_84 94732 95880 - 2.A.103.1.3
pfam HRGMv2_3440_5 HRGMv2_3440_5_85 95855 97018 - Mur_ligase_M
TC HRGMv2_3440_5 HRGMv2_3440_5_86 97015 98004 - 9.B.146.1.3
Gene ID: HRGMv2_3440_5_79
Type: TC
Location: 90615 - 91496 (+)
Gene ID: HRGMv2_3440_5_80
Type: TC
Location: 91480 - 92118 (+)
Gene ID: HRGMv2_3440_5_81
Type: TC
Location: 92111 - 92950 (+)
Gene ID: HRGMv2_3440_5_82
Type: pfam
Location: 93041 - 93856 (-)
Gene ID: HRGMv2_3440_5_83
Type: CAZyme
Location: 93846 - 94670 (-)
Gene ID: HRGMv2_3440_5_84
Type: TC
Location: 94732 - 95880 (-)
Gene ID: HRGMv2_3440_5_85
Type: pfam
Location: 95855 - 97018 (-)
Gene ID: HRGMv2_3440_5_86
Type: TC
Location: 97015 - 98004 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RFN20
→
Family
CAG-288
→
Genus
CAG-345
→
Species
CAG-345 sp000433315

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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