Cluster: HRGMv2_3440_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3440
- CGC Family ID: CGCFAM_03257
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3440_3 | HRGMv2_3440_3_5 | 4068 | 5639 | - | 3.A.1.121.4 |
| pfam | HRGMv2_3440_3 | HRGMv2_3440_3_6 | 5623 | 6639 | - | DHH | DHHA1 |
| NULL(UNKNOWN) | HRGMv2_3440_3 | HRGMv2_3440_3_7 | 6649 | 6813 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3440_3 | HRGMv2_3440_3_8 | 6890 | 8575 | - | GH13_20 |
Gene ID: HRGMv2_3440_3_5
Type: TC
Location: 4068 - 5639 (-)
Type: TC
Location: 4068 - 5639 (-)
Gene ID: HRGMv2_3440_3_6
Type: pfam
Location: 5623 - 6639 (-)
Type: pfam
Location: 5623 - 6639 (-)
Gene ID: HRGMv2_3440_3_7
Type:
Location: 6649 - 6813 (-)
Type:
Location: 6649 - 6813 (-)
Gene ID: HRGMv2_3440_3_8
Type: CAZyme
Location: 6890 - 8575 (-)
Type: CAZyme
Location: 6890 - 8575 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RFN20
Family
CAG-288
Genus
CAG-345
Species
CAG-345 sp000433315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.