Genome Details
Selected Rep_genome_ID: HRGMv2_3006
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp958427375
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3006 | 2,109,425 | 94.29% | 0.671% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3006_CGC1 | CGCFAM_00003 | Yes | 10 | 5 | |
| HRGMv2_3006_CGC15 | CGCFAM_00038 | Yes | 3 | 1 | |
| HRGMv2_3006_CGC11 | CGCFAM_00302 | Yes | 10 | 1 | |
| HRGMv2_3006_CGC20 | CGCFAM_00559 | Yes | 6 | 1 | |
| HRGMv2_3006_CGC22 | CGCFAM_00768 | Yes | 5 | 1 | |
| HRGMv2_3006_CGC16 | CGCFAM_01354 | Yes | 4 | 1 | |
| HRGMv2_3006_CGC2 | CGCFAM_02349 | Yes | 3 | 1 | |
| HRGMv2_3006_CGC14 | CGCFAM_05703 | Yes | 5 | 1 | |
| HRGMv2_3006_CGC4 | CGCFAM_06198 | Yes | 5 | 1 | |
| HRGMv2_3006_CGC18 | CGCFAM_10253 | Yes | 8 | 1 | |
| HRGMv2_3006_CGC5 | CGCFAM_10281 | Yes | 7 | 1 |
Top CAZyme Families