Cluster: HRGMv2_3006_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3006
- CGC Family ID: CGCFAM_02349
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3006_1 | HRGMv2_3006_1_62 | 66454 | 67866 | - | 2.A.22.5.2 |
| STP | HRGMv2_3006_1 | HRGMv2_3006_1_63 | 68024 | 68920 | - | PfkB |
| CAZyme | HRGMv2_3006_1 | HRGMv2_3006_1_64 | 68925 | 71324 | - | GT35 |
Gene ID: HRGMv2_3006_1_62
Type: TC
Location: 66454 - 67866 (-)
Type: TC
Location: 66454 - 67866 (-)
Gene ID: HRGMv2_3006_1_63
Type: STP
Location: 68024 - 68920 (-)
Type: STP
Location: 68024 - 68920 (-)
Gene ID: HRGMv2_3006_1_64
Type: CAZyme
Location: 68925 - 71324 (-)
Type: CAZyme
Location: 68925 - 71324 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp958427375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.