dbCAN HGM

Cluster: HRGMv2_3006_CGC11

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_3006_4	HRGMv2_3006_4_58	61242	62066	-	3.D.6.1.3
TC	HRGMv2_3006_4	HRGMv2_3006_4_59	62085	62669	-	3.D.6.1.2
TC	HRGMv2_3006_4	HRGMv2_3006_4_60	62669	63361	-	3.D.6.1.2
pfam	HRGMv2_3006_4	HRGMv2_3006_4_61	63375	63914	-	FMN_bind
TC	HRGMv2_3006_4	HRGMv2_3006_4_62	63914	64960	-	3.D.6.1.2
TC	HRGMv2_3006_4	HRGMv2_3006_4_63	64960	66324	-	3.D.6.1.2
CAZyme	HRGMv2_3006_4	HRGMv2_3006_4_64	66710	68692	+	CBM48 \| GH13_9
pfam	HRGMv2_3006_4	HRGMv2_3006_4_65	68917	70413	+	Sel1 \| Sel1 \| Sel1 \| Sel1 \| Sel1 \| Sel1 \| Sel1 \| Sel1 \| Sel1 \| Sel1 \| Sel1
NULL(UNKNOWN)	HRGMv2_3006_4	HRGMv2_3006_4_66	70676	71221	-	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_3006_4	HRGMv2_3006_4_67	71272	72675	-	2.A.118.1.4

Gene ID: HRGMv2_3006_4_58
Type: TC
Location: 61242 - 62066 (-)

Gene ID: HRGMv2_3006_4_59
Type: TC
Location: 62085 - 62669 (-)

Gene ID: HRGMv2_3006_4_60
Type: TC
Location: 62669 - 63361 (-)

Gene ID: HRGMv2_3006_4_61
Type: pfam
Location: 63375 - 63914 (-)

Gene ID: HRGMv2_3006_4_62
Type: TC
Location: 63914 - 64960 (-)

Gene ID: HRGMv2_3006_4_63
Type: TC
Location: 64960 - 66324 (-)

Gene ID: HRGMv2_3006_4_64
Type: CAZyme
Location: 66710 - 68692 (+)

Gene ID: HRGMv2_3006_4_65
Type: pfam
Location: 68917 - 70413 (+)

Gene ID: HRGMv2_3006_4_66
Type:
Location: 70676 - 71221 (-)

Gene ID: HRGMv2_3006_4_67
Type: TC
Location: 71272 - 72675 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_3006_4_59	vegetarian > vegan	1.00586	0.00110
HRGMv2_3006_4_60	vegetarian > omnivore	1.81490	0.00038
HRGMv2_3006_4_63	vegetarian > omnivore	1.64107	0.00038