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Cluster: HRGMv2_3006_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3006_14 HRGMv2_3006_14_31 28864 29814 - 3.A.1.5.37
TC HRGMv2_3006_14 HRGMv2_3006_14_32 29816 30793 - 3.A.1.5.2
TC HRGMv2_3006_14 HRGMv2_3006_14_33 30805 31677 - 3.A.1.5.20
TC HRGMv2_3006_14 HRGMv2_3006_14_34 31696 32625 - 3.A.1.5.39
TC HRGMv2_3006_14 HRGMv2_3006_14_35 32707 34305 - 3.A.1.5.27
pfam HRGMv2_3006_14 HRGMv2_3006_14_36 34364 35554 - FGE-sulfatase | mtd_2nd
NULL(UNKNOWN) HRGMv2_3006_14 HRGMv2_3006_14_37 35547 35831 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3006_14 HRGMv2_3006_14_38 35843 36931 - GH109
Gene ID: HRGMv2_3006_14_31
Type: TC
Location: 28864 - 29814 (-)
Gene ID: HRGMv2_3006_14_32
Type: TC
Location: 29816 - 30793 (-)
Gene ID: HRGMv2_3006_14_33
Type: TC
Location: 30805 - 31677 (-)
Gene ID: HRGMv2_3006_14_34
Type: TC
Location: 31696 - 32625 (-)
Gene ID: HRGMv2_3006_14_35
Type: TC
Location: 32707 - 34305 (-)
Gene ID: HRGMv2_3006_14_36
Type: pfam
Location: 34364 - 35554 (-)
Gene ID: HRGMv2_3006_14_37
Type:
Location: 35547 - 35831 (-)
Gene ID: HRGMv2_3006_14_38
Type: CAZyme
Location: 35843 - 36931 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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