Genome Details
Selected Rep_genome_ID: HRGMv2_2979
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp934474025
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH085_109 | 3,318,946 | 97.99% | 0.34% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2979 | 2,326,602 | 97.98% | 0% | UK | Europe | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K127_MEGAHIT__Hadza_MoBio_hadza-A-D_C_6_1128.84 | 2,001,694 | 95.97% | 0% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2979_CGC25 | CGCFAM_00317 | Yes | 14 | 2 | |
| HRGMv2_2979_CGC24 | CGCFAM_00532 | Yes | 5 | 1 | |
| HRGMv2_2979_CGC1 | CGCFAM_00917 | Yes | 4 | 1 | |
| HRGMv2_2979_CGC5 | CGCFAM_01574 | Yes | 6 | 1 | |
| HRGMv2_2979_CGC18 | CGCFAM_01591 | Yes | 6 | 1 | |
| HRGMv2_2979_CGC6 | CGCFAM_01951 | Yes | 3 | 2 | |
| HRGMv2_2979_CGC12 | CGCFAM_03517 | Yes | 8 | 4 | |
| HRGMv2_2979_CGC16 | CGCFAM_04664 | Yes | 5 | 1 | |
| HRGMv2_2979_CGC7 | CGCFAM_10266 | Yes | 3 | 1 |
Top CAZyme Families