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Cluster: HRGMv2_2979_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2979_33 HRGMv2_2979_33_1 74 484 - 3.A.2.1.5
TC HRGMv2_2979_33 HRGMv2_2979_33_2 499 1890 - 3.A.2.1.5
TC HRGMv2_2979_33 HRGMv2_2979_33_3 1923 2825 - 3.A.2.1.5
TC HRGMv2_2979_33 HRGMv2_2979_33_4 2838 4856 - 3.A.2.1.2
pfam HRGMv2_2979_33 HRGMv2_2979_33_5 4857 5366 - ATP-synt_B
TC HRGMv2_2979_33 HRGMv2_2979_33_6 5406 5627 - 3.A.2.1.5
TC HRGMv2_2979_33 HRGMv2_2979_33_7 5675 6361 - 3.A.2.1.5
NULL(UNKNOWN) HRGMv2_2979_33 HRGMv2_2979_33_8 6583 6987 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2979_33 HRGMv2_2979_33_9 6995 7930 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
CAZyme HRGMv2_2979_33 HRGMv2_2979_33_10 7927 9063 - GT4
CAZyme HRGMv2_2979_33 HRGMv2_2979_33_11 9056 10204 - GT4
pfam HRGMv2_2979_33 HRGMv2_2979_33_12 10240 11256 - Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
pfam HRGMv2_2979_33 HRGMv2_2979_33_13 11278 12342 - NTP_transferase | NTP_transf_3 | ManC_GMP_beta-helix
TC HRGMv2_2979_33 HRGMv2_2979_33_14 12405 13787 - 9.B.18.1.3
Gene ID: HRGMv2_2979_33_1
Type: TC
Location: 74 - 484 (-)
Gene ID: HRGMv2_2979_33_2
Type: TC
Location: 499 - 1890 (-)
Gene ID: HRGMv2_2979_33_3
Type: TC
Location: 1923 - 2825 (-)
Gene ID: HRGMv2_2979_33_4
Type: TC
Location: 2838 - 4856 (-)
Gene ID: HRGMv2_2979_33_5
Type: pfam
Location: 4857 - 5366 (-)
Gene ID: HRGMv2_2979_33_6
Type: TC
Location: 5406 - 5627 (-)
Gene ID: HRGMv2_2979_33_7
Type: TC
Location: 5675 - 6361 (-)
Gene ID: HRGMv2_2979_33_8
Type:
Location: 6583 - 6987 (-)
Gene ID: HRGMv2_2979_33_9
Type: pfam
Location: 6995 - 7930 (-)
Gene ID: HRGMv2_2979_33_10
Type: CAZyme
Location: 7927 - 9063 (-)
Gene ID: HRGMv2_2979_33_11
Type: CAZyme
Location: 9056 - 10204 (-)
Gene ID: HRGMv2_2979_33_12
Type: pfam
Location: 10240 - 11256 (-)
Gene ID: HRGMv2_2979_33_13
Type: pfam
Location: 11278 - 12342 (-)
Gene ID: HRGMv2_2979_33_14
Type: TC
Location: 12405 - 13787 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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