dbCAN Logo

Cluster: HRGMv2_2979_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2979_8 HRGMv2_2979_8_40 42126 43565 - 2.A.66.2.2
CAZyme HRGMv2_2979_8 HRGMv2_2979_8_41 43584 44555 - GT2
STP HRGMv2_2979_8 HRGMv2_2979_8_42 44735 45934 - Fer4 | Fer4
pfam HRGMv2_2979_8 HRGMv2_2979_8_43 45938 47056 - PS_pyruv_trans
CAZyme HRGMv2_2979_8 HRGMv2_2979_8_44 47057 47815 - GT111
pfam HRGMv2_2979_8 HRGMv2_2979_8_45 47825 49003 - EpsG
CAZyme HRGMv2_2979_8 HRGMv2_2979_8_46 49000 50100 - GT4
CAZyme HRGMv2_2979_8 HRGMv2_2979_8_47 50236 51246 - GT8
Gene ID: HRGMv2_2979_8_40
Type: TC
Location: 42126 - 43565 (-)
Gene ID: HRGMv2_2979_8_41
Type: CAZyme
Location: 43584 - 44555 (-)
Gene ID: HRGMv2_2979_8_42
Type: STP
Location: 44735 - 45934 (-)
Gene ID: HRGMv2_2979_8_43
Type: pfam
Location: 45938 - 47056 (-)
Gene ID: HRGMv2_2979_8_44
Type: CAZyme
Location: 47057 - 47815 (-)
Gene ID: HRGMv2_2979_8_45
Type: pfam
Location: 47825 - 49003 (-)
Gene ID: HRGMv2_2979_8_46
Type: CAZyme
Location: 49000 - 50100 (-)
Gene ID: HRGMv2_2979_8_47
Type: CAZyme
Location: 50236 - 51246 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List