Cluster: HRGMv2_2979_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2979
- CGC Family ID: CGCFAM_04664
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2979_10 | HRGMv2_2979_10_58 | 64699 | 65580 | - | 2.A.115.1.1 |
| TC | HRGMv2_2979_10 | HRGMv2_2979_10_59 | 66144 | 66920 | + | 3.A.1.103.4 |
| TC | HRGMv2_2979_10 | HRGMv2_2979_10_60 | 66920 | 68170 | + | 3.A.1.103.4 |
| pfam | HRGMv2_2979_10 | HRGMv2_2979_10_61 | 68173 | 69270 | + | Methyltransf_21 |
| CAZyme | HRGMv2_2979_10 | HRGMv2_2979_10_62 | 69270 | 71807 | + | GT4 |
Gene ID: HRGMv2_2979_10_58
Type: TC
Location: 64699 - 65580 (-)
Type: TC
Location: 64699 - 65580 (-)
Gene ID: HRGMv2_2979_10_59
Type: TC
Location: 66144 - 66920 (+)
Type: TC
Location: 66144 - 66920 (+)
Gene ID: HRGMv2_2979_10_60
Type: TC
Location: 66920 - 68170 (+)
Type: TC
Location: 66920 - 68170 (+)
Gene ID: HRGMv2_2979_10_61
Type: pfam
Location: 68173 - 69270 (+)
Type: pfam
Location: 68173 - 69270 (+)
Gene ID: HRGMv2_2979_10_62
Type: CAZyme
Location: 69270 - 71807 (+)
Type: CAZyme
Location: 69270 - 71807 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp934474025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.