Cluster: HRGMv2_2979_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2979
- CGC Family ID: CGCFAM_00532
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2979_32 | HRGMv2_2979_32_7 | 5212 | 6408 | - | GT4 |
| pfam | HRGMv2_2979_32 | HRGMv2_2979_32_8 | 6411 | 7148 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| TC | HRGMv2_2979_32 | HRGMv2_2979_32_9 | 7148 | 7864 | - | 3.A.1.124.6 |
| NULL(UNKNOWN) | HRGMv2_2979_32 | HRGMv2_2979_32_10 | 7948 | 8781 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2979_32 | HRGMv2_2979_32_11 | 9101 | 9658 | - | 2.A.7.2.1 |
Gene ID: HRGMv2_2979_32_7
Type: CAZyme
Location: 5212 - 6408 (-)
Type: CAZyme
Location: 5212 - 6408 (-)
Gene ID: HRGMv2_2979_32_8
Type: pfam
Location: 6411 - 7148 (-)
Type: pfam
Location: 6411 - 7148 (-)
Gene ID: HRGMv2_2979_32_9
Type: TC
Location: 7148 - 7864 (-)
Type: TC
Location: 7148 - 7864 (-)
Gene ID: HRGMv2_2979_32_10
Type:
Location: 7948 - 8781 (-)
Type:
Location: 7948 - 8781 (-)
Gene ID: HRGMv2_2979_32_11
Type: TC
Location: 9101 - 9658 (-)
Type: TC
Location: 9101 - 9658 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp934474025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.