Cluster: HRGMv2_2979_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2979
- CGC Family ID: CGCFAM_01951
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2979_3 | HRGMv2_2979_3_55 | 56094 | 58430 | + | CBM3 | GH9 |
| CAZyme | HRGMv2_2979_3 | HRGMv2_2979_3_56 | 58747 | 61791 | + | CBM4 | GH9 |
| TC | HRGMv2_2979_3 | HRGMv2_2979_3_57 | 61916 | 62611 | - | 1.C.82.1.1 |
Gene ID: HRGMv2_2979_3_55
Type: CAZyme
Location: 56094 - 58430 (+)
Type: CAZyme
Location: 56094 - 58430 (+)
Gene ID: HRGMv2_2979_3_56
Type: CAZyme
Location: 58747 - 61791 (+)
Type: CAZyme
Location: 58747 - 61791 (+)
Gene ID: HRGMv2_2979_3_57
Type: TC
Location: 61916 - 62611 (-)
Type: TC
Location: 61916 - 62611 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp934474025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.