Genome Details
Selected Rep_genome_ID: HRGMv2_2976
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2976 | 3,182,078 | 99.32% | 1.006% | Malaysia | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2976_CGC2 | CGCFAM_00004 | Yes | 9 | 4 | alpha-glucan |
| HRGMv2_2976_CGC8 | CGCFAM_00073 | Yes | 3 | 1 | |
| HRGMv2_2976_CGC1 | CGCFAM_00324 | Yes | 3 | 2 | |
| HRGMv2_2976_CGC5 | CGCFAM_00477 | Yes | 4 | 1 | |
| HRGMv2_2976_CGC20 | CGCFAM_01230 | Yes | 6 | 2 | |
| HRGMv2_2976_CGC4 | CGCFAM_01272 | Yes | 7 | 2 | |
| HRGMv2_2976_CGC12 | CGCFAM_02484 | Yes | 8 | 3 | |
| HRGMv2_2976_CGC14 | CGCFAM_03800 | Yes | 3 | 1 | |
| HRGMv2_2976_CGC19 | CGCFAM_03959 | Yes | 4 | 1 | |
| HRGMv2_2976_CGC11 | CGCFAM_04067 | Yes | 9 | 1 | |
| HRGMv2_2976_CGC15 | CGCFAM_10264 | Yes | 9 | 1 |
Top CAZyme Families