Cluster: HRGMv2_2976_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2976
- CGC Family ID: CGCFAM_03959
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2976_34 | HRGMv2_2976_34_5 | 4928 | 5632 | + | 3.A.1.8.1 |
| TC | HRGMv2_2976_34 | HRGMv2_2976_34_6 | 5637 | 6683 | + | 3.A.1.10.2 |
| pfam | HRGMv2_2976_34 | HRGMv2_2976_34_7 | 6732 | 8183 | - | PIN7 |
| CAZyme | HRGMv2_2976_34 | HRGMv2_2976_34_8 | 8215 | 9438 | - | GH24 | SLH |
Gene ID: HRGMv2_2976_34_5
Type: TC
Location: 4928 - 5632 (+)
Type: TC
Location: 4928 - 5632 (+)
Gene ID: HRGMv2_2976_34_6
Type: TC
Location: 5637 - 6683 (+)
Type: TC
Location: 5637 - 6683 (+)
Gene ID: HRGMv2_2976_34_7
Type: pfam
Location: 6732 - 8183 (-)
Type: pfam
Location: 6732 - 8183 (-)
Gene ID: HRGMv2_2976_34_8
Type: CAZyme
Location: 8215 - 9438 (-)
Type: CAZyme
Location: 8215 - 9438 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2976_34_5 | vegetarian > vegan | 1.36168 | 0.00241 |