Cluster: HRGMv2_2976_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2976
- CGC Family ID: CGCFAM_01230
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2976_52 | HRGMv2_2976_52_2 | 484 | 1143 | - | 9.B.28.1.2 |
| CAZyme | HRGMv2_2976_52 | HRGMv2_2976_52_3 | 1159 | 2817 | - | GH13_31 |
| CAZyme | HRGMv2_2976_52 | HRGMv2_2976_52_4 | 2830 | 4788 | - | GH31_1 |
| TC | HRGMv2_2976_52 | HRGMv2_2976_52_5 | 4873 | 5748 | - | 3.A.1.1.9 |
| TC | HRGMv2_2976_52 | HRGMv2_2976_52_6 | 5765 | 6667 | - | 3.A.1.1.9 |
| TC | HRGMv2_2976_52 | HRGMv2_2976_52_7 | 6686 | 8365 | - | 3.A.1.1.9 |
Gene ID: HRGMv2_2976_52_2
Type: TC
Location: 484 - 1143 (-)
Type: TC
Location: 484 - 1143 (-)
Gene ID: HRGMv2_2976_52_3
Type: CAZyme
Location: 1159 - 2817 (-)
Type: CAZyme
Location: 1159 - 2817 (-)
Gene ID: HRGMv2_2976_52_4
Type: CAZyme
Location: 2830 - 4788 (-)
Type: CAZyme
Location: 2830 - 4788 (-)
Gene ID: HRGMv2_2976_52_5
Type: TC
Location: 4873 - 5748 (-)
Type: TC
Location: 4873 - 5748 (-)
Gene ID: HRGMv2_2976_52_6
Type: TC
Location: 5765 - 6667 (-)
Type: TC
Location: 5765 - 6667 (-)
Gene ID: HRGMv2_2976_52_7
Type: TC
Location: 6686 - 8365 (-)
Type: TC
Location: 6686 - 8365 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.