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Cluster: HRGMv2_2976_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2976_2 HRGMv2_2976_2_201 233083 233970 + 2.A.7.3.53
pfam HRGMv2_2976_2 HRGMv2_2976_2_202 234012 234413 - 4HBT | 4HBT_3
NULL(UNKNOWN) HRGMv2_2976_2 HRGMv2_2976_2_203 234497 234616 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2976_2 HRGMv2_2976_2_204 234613 236514 + GH13_9
CAZyme HRGMv2_2976_2 HRGMv2_2976_2_205 236531 238966 + GT35
pfam HRGMv2_2976_2 HRGMv2_2976_2_206 239043 240176 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2976_2 HRGMv2_2976_2_207 240189 241292 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2976_2 HRGMv2_2976_2_208 241305 242747 + GT5
CAZyme HRGMv2_2976_2 HRGMv2_2976_2_209 242818 245961 + GH13_39 | GH77
Gene ID: HRGMv2_2976_2_201
Type: TC
Location: 233083 - 233970 (+)
Gene ID: HRGMv2_2976_2_202
Type: pfam
Location: 234012 - 234413 (-)
Gene ID: HRGMv2_2976_2_203
Type:
Location: 234497 - 234616 (+)
Gene ID: HRGMv2_2976_2_204
Type: CAZyme
Location: 234613 - 236514 (+)
Gene ID: HRGMv2_2976_2_205
Type: CAZyme
Location: 236531 - 238966 (+)
Gene ID: HRGMv2_2976_2_206
Type: pfam
Location: 239043 - 240176 (+)
Gene ID: HRGMv2_2976_2_207
Type: pfam
Location: 240189 - 241292 (+)
Gene ID: HRGMv2_2976_2_208
Type: CAZyme
Location: 241305 - 242747 (+)
Gene ID: HRGMv2_2976_2_209
Type: CAZyme
Location: 242818 - 245961 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
HGM13006
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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