Cluster: HRGMv2_2976_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2976
- CGC Family ID: CGCFAM_01272
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2976_3 | HRGMv2_2976_3_78 | 86752 | 87408 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_2976_3 | HRGMv2_2976_3_79 | 87439 | 88203 | + | GT111 |
| pfam | HRGMv2_2976_3 | HRGMv2_2976_3_80 | 88206 | 89033 | + | LicD |
| pfam | HRGMv2_2976_3 | HRGMv2_2976_3_81 | 89030 | 89422 | + | CTP_transf_like |
| CAZyme | HRGMv2_2976_3 | HRGMv2_2976_3_82 | 89419 | 90411 | + | GT2 |
| pfam | HRGMv2_2976_3 | HRGMv2_2976_3_83 | 90423 | 91625 | + | Wzy_C |
| TC | HRGMv2_2976_3 | HRGMv2_2976_3_84 | 91646 | 93190 | + | 2.A.66.1.40 |
Gene ID: HRGMv2_2976_3_78
Type: TC
Location: 86752 - 87408 (+)
Type: TC
Location: 86752 - 87408 (+)
Gene ID: HRGMv2_2976_3_79
Type: CAZyme
Location: 87439 - 88203 (+)
Type: CAZyme
Location: 87439 - 88203 (+)
Gene ID: HRGMv2_2976_3_80
Type: pfam
Location: 88206 - 89033 (+)
Type: pfam
Location: 88206 - 89033 (+)
Gene ID: HRGMv2_2976_3_81
Type: pfam
Location: 89030 - 89422 (+)
Type: pfam
Location: 89030 - 89422 (+)
Gene ID: HRGMv2_2976_3_82
Type: CAZyme
Location: 89419 - 90411 (+)
Type: CAZyme
Location: 89419 - 90411 (+)
Gene ID: HRGMv2_2976_3_83
Type: pfam
Location: 90423 - 91625 (+)
Type: pfam
Location: 90423 - 91625 (+)
Gene ID: HRGMv2_2976_3_84
Type: TC
Location: 91646 - 93190 (+)
Type: TC
Location: 91646 - 93190 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.