Genome Details
Selected Rep_genome_ID: HRGMv2_2970
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417865
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2970 | 2,621,746 | 95.97% | 0.284% | UK | Europe | HRGM |
| MGYG000004586 | 2,425,197 | 91.38% | 1.57% | France | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2970_CGC14 | CGCFAM_00089 | Yes | 4 | 1 | |
| HRGMv2_2970_CGC22 | CGCFAM_00172 | Yes | 5 | 1 | |
| HRGMv2_2970_CGC13 | CGCFAM_00532 | Yes | 12 | 1 | |
| HRGMv2_2970_CGC16 | CGCFAM_02333 | Yes | 5 | 1 | |
| HRGMv2_2970_CGC17 | CGCFAM_02511 | Yes | 4 | 1 | |
| HRGMv2_2970_CGC6 | CGCFAM_03245 | Yes | 4 | 1 | |
| HRGMv2_2970_CGC18 | CGCFAM_04293 | Yes | 4 | 2 | |
| HRGMv2_2970_CGC8 | CGCFAM_06786 | Yes | 7 | 1 |
Top CAZyme Families