Cluster: HRGMv2_2970_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2970
- CGC Family ID: CGCFAM_02511
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2970_108 | HRGMv2_2970_108_1 | 2 | 823 | + | 3.A.1.103.1 |
| pfam | HRGMv2_2970_108 | HRGMv2_2970_108_2 | 2028 | 2954 | + | Methyltransf_21 |
| NULL(UNKNOWN) | HRGMv2_2970_108 | HRGMv2_2970_108_3 | 3030 | 3524 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2970_108 | HRGMv2_2970_108_4 | 3521 | 4591 | + | GT4 |
Gene ID: HRGMv2_2970_108_1
Type: TC
Location: 2 - 823 (+)
Type: TC
Location: 2 - 823 (+)
Gene ID: HRGMv2_2970_108_2
Type: pfam
Location: 2028 - 2954 (+)
Type: pfam
Location: 2028 - 2954 (+)
Gene ID: HRGMv2_2970_108_3
Type:
Location: 3030 - 3524 (+)
Type:
Location: 3030 - 3524 (+)
Gene ID: HRGMv2_2970_108_4
Type: CAZyme
Location: 3521 - 4591 (+)
Type: CAZyme
Location: 3521 - 4591 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.