Cluster: HRGMv2_2970_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2970
- CGC Family ID: CGCFAM_00089
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2970_67 | HRGMv2_2970_67_1 | 2 | 1336 | - | 2.A.66.1.32 |
| pfam | HRGMv2_2970_67 | HRGMv2_2970_67_2 | 1578 | 3737 | - | S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5 |
| pfam | HRGMv2_2970_67 | HRGMv2_2970_67_3 | 3893 | 4312 | - | HSP20 | ArsA_HSP20 |
| CAZyme | HRGMv2_2970_67 | HRGMv2_2970_67_4 | 4607 | 6466 | - | CBM22 | GH10 |
Gene ID: HRGMv2_2970_67_1
Type: TC
Location: 2 - 1336 (-)
Type: TC
Location: 2 - 1336 (-)
Gene ID: HRGMv2_2970_67_2
Type: pfam
Location: 1578 - 3737 (-)
Type: pfam
Location: 1578 - 3737 (-)
Gene ID: HRGMv2_2970_67_3
Type: pfam
Location: 3893 - 4312 (-)
Type: pfam
Location: 3893 - 4312 (-)
Gene ID: HRGMv2_2970_67_4
Type: CAZyme
Location: 4607 - 6466 (-)
Type: CAZyme
Location: 4607 - 6466 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.