Cluster: HRGMv2_2970_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2970
- CGC Family ID: CGCFAM_00172
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2970_187 | HRGMv2_2970_187_1 | 1 | 282 | + | 3.A.1.134.4 |
| TC | HRGMv2_2970_187 | HRGMv2_2970_187_2 | 279 | 2285 | + | 3.A.1.134.9 |
| NULL(UNKNOWN) | HRGMv2_2970_187 | HRGMv2_2970_187_3 | 2463 | 2915 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2970_187 | HRGMv2_2970_187_4 | 2944 | 3669 | + | GT51 |
| TC | HRGMv2_2970_187 | HRGMv2_2970_187_5 | 4237 | 5253 | + | 3.A.1.6.1 |
Gene ID: HRGMv2_2970_187_1
Type: TC
Location: 1 - 282 (+)
Type: TC
Location: 1 - 282 (+)
Gene ID: HRGMv2_2970_187_2
Type: TC
Location: 279 - 2285 (+)
Type: TC
Location: 279 - 2285 (+)
Gene ID: HRGMv2_2970_187_3
Type:
Location: 2463 - 2915 (+)
Type:
Location: 2463 - 2915 (+)
Gene ID: HRGMv2_2970_187_4
Type: CAZyme
Location: 2944 - 3669 (+)
Type: CAZyme
Location: 2944 - 3669 (+)
Gene ID: HRGMv2_2970_187_5
Type: TC
Location: 4237 - 5253 (+)
Type: TC
Location: 4237 - 5253 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp019417865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.