Genome Details
Selected Rep_genome_ID: HRGMv2_2954
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdigallinarum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2954 | 2,057,681 | 95.74% | 0% | Japan | Asia | HRGM |
| MGYG000000937 | 2,265,948 | 95.75% | 0.13% | Germany | Europe | UHGG |
| Rep_3352 | 2,010,557 | 96.4206% | 0.671141% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2954_CGC6 | CGCFAM_00004 | Yes | 10 | 2 | alpha-glucan |
| HRGMv2_2954_CGC3 | CGCFAM_00006 | Yes | 11 | 6 | |
| HRGMv2_2954_CGC7 | CGCFAM_02236 | Yes | 4 | 1 | |
| HRGMv2_2954_CGC15 | CGCFAM_05920 | Yes | 7 | 2 | |
| HRGMv2_2954_CGC16 | CGCFAM_06194 | Yes | 3 | 1 | |
| HRGMv2_2954_CGC2 | CGCFAM_09108 | Yes | 10 | 2 | |
| HRGMv2_2954_CGC10 | CGCFAM_09110 | Yes | 4 | 1 | |
| HRGMv2_2954_CGC17 | CGCFAM_10258 | Yes | 4 | 1 | |
| HRGMv2_2954_CGC20 | CGCFAM_10259 | Yes | 7 | 1 |
Top CAZyme Families