Cluster: HRGMv2_2954_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2954
- CGC Family ID: CGCFAM_02236
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2954_8 | HRGMv2_2954_8_7 | 8174 | 9016 | - | CE4 |
| pfam | HRGMv2_2954_8 | HRGMv2_2954_8_8 | 9073 | 10329 | - | T2SSF | T2SSF |
| TC | HRGMv2_2954_8 | HRGMv2_2954_8_9 | 10336 | 11430 | - | 3.A.15.2.1 |
| TC | HRGMv2_2954_8 | HRGMv2_2954_8_10 | 11457 | 13148 | - | 3.A.15.4.1 |
Gene ID: HRGMv2_2954_8_7
Type: CAZyme
Location: 8174 - 9016 (-)
Type: CAZyme
Location: 8174 - 9016 (-)
Gene ID: HRGMv2_2954_8_8
Type: pfam
Location: 9073 - 10329 (-)
Type: pfam
Location: 9073 - 10329 (-)
Gene ID: HRGMv2_2954_8_9
Type: TC
Location: 10336 - 11430 (-)
Type: TC
Location: 10336 - 11430 (-)
Gene ID: HRGMv2_2954_8_10
Type: TC
Location: 11457 - 13148 (-)
Type: TC
Location: 11457 - 13148 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.