Cluster: HRGMv2_2954_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2954
- CGC Family ID: CGCFAM_09110
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2954_14 | HRGMv2_2954_14_6 | 5630 | 6868 | - | GH3 |
| pfam | HRGMv2_2954_14 | HRGMv2_2954_14_7 | 6964 | 7503 | - | Rubrerythrin | RUBY_RBDX |
| TC | HRGMv2_2954_14 | HRGMv2_2954_14_8 | 7791 | 9131 | + | 2.A.38.4.3 |
| TC | HRGMv2_2954_14 | HRGMv2_2954_14_9 | 9236 | 9886 | + | 2.A.38.4.4 |
Gene ID: HRGMv2_2954_14_6
Type: CAZyme
Location: 5630 - 6868 (-)
Type: CAZyme
Location: 5630 - 6868 (-)
Gene ID: HRGMv2_2954_14_7
Type: pfam
Location: 6964 - 7503 (-)
Type: pfam
Location: 6964 - 7503 (-)
Gene ID: HRGMv2_2954_14_8
Type: TC
Location: 7791 - 9131 (+)
Type: TC
Location: 7791 - 9131 (+)
Gene ID: HRGMv2_2954_14_9
Type: TC
Location: 9236 - 9886 (+)
Type: TC
Location: 9236 - 9886 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.