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Cluster: HRGMv2_2954_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2954_3 HRGMv2_2954_3_70 85417 86541 + GT4
pfam HRGMv2_2954_3 HRGMv2_2954_3_71 86516 86815 + Acyl_transf_3
CAZyme HRGMv2_2954_3 HRGMv2_2954_3_72 86855 87181 + GT32
CAZyme HRGMv2_2954_3 HRGMv2_2954_3_73 87707 88582 + GT2
TC HRGMv2_2954_3 HRGMv2_2954_3_74 88603 89697 + 9.B.183.1.9
pfam HRGMv2_2954_3 HRGMv2_2954_3_75 89727 90269 + Hexapep | Hexapep_2
CAZyme HRGMv2_2954_3 HRGMv2_2954_3_76 90291 91496 + GT4
CAZyme HRGMv2_2954_3 HRGMv2_2954_3_77 91493 92230 + GT32
pfam HRGMv2_2954_3 HRGMv2_2954_3_78 92277 93443 + Epimerase_2
NULL(UNKNOWN) HRGMv2_2954_3 HRGMv2_2954_3_79 93455 94705 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2954_3 HRGMv2_2954_3_80 94752 95909 + GT4
Gene ID: HRGMv2_2954_3_70
Type: CAZyme
Location: 85417 - 86541 (+)
Gene ID: HRGMv2_2954_3_71
Type: pfam
Location: 86516 - 86815 (+)
Gene ID: HRGMv2_2954_3_72
Type: CAZyme
Location: 86855 - 87181 (+)
Gene ID: HRGMv2_2954_3_73
Type: CAZyme
Location: 87707 - 88582 (+)
Gene ID: HRGMv2_2954_3_74
Type: TC
Location: 88603 - 89697 (+)
Gene ID: HRGMv2_2954_3_75
Type: pfam
Location: 89727 - 90269 (+)
Gene ID: HRGMv2_2954_3_76
Type: CAZyme
Location: 90291 - 91496 (+)
Gene ID: HRGMv2_2954_3_77
Type: CAZyme
Location: 91493 - 92230 (+)
Gene ID: HRGMv2_2954_3_78
Type: pfam
Location: 92277 - 93443 (+)
Gene ID: HRGMv2_2954_3_79
Type:
Location: 93455 - 94705 (+)
Gene ID: HRGMv2_2954_3_80
Type: CAZyme
Location: 94752 - 95909 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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