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Cluster: HRGMv2_2954_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2954_6 HRGMv2_2954_6_35 34717 36153 - GT5
pfam HRGMv2_2954_6 HRGMv2_2954_6_36 36258 37382 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2954_6 HRGMv2_2954_6_37 37379 38599 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2954_6 HRGMv2_2954_6_38 38686 40686 - CBM48 | GH13_9
NULL(UNKNOWN) HRGMv2_2954_6 HRGMv2_2954_6_39 41400 41837 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2954_6 HRGMv2_2954_6_40 42237 43940 + MatE | MatE
TC HRGMv2_2954_6 HRGMv2_2954_6_41 43962 52952 + 4.C.1.1.6
STP HRGMv2_2954_6 HRGMv2_2954_6_42 53080 53373 + STAS
NULL(UNKNOWN) HRGMv2_2954_6 HRGMv2_2954_6_43 53708 53842 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2954_6 HRGMv2_2954_6_44 54163 56814 + 3.A.3.2.21
Gene ID: HRGMv2_2954_6_35
Type: CAZyme
Location: 34717 - 36153 (-)
Gene ID: HRGMv2_2954_6_36
Type: pfam
Location: 36258 - 37382 (-)
Gene ID: HRGMv2_2954_6_37
Type: pfam
Location: 37379 - 38599 (-)
Gene ID: HRGMv2_2954_6_38
Type: CAZyme
Location: 38686 - 40686 (-)
Gene ID: HRGMv2_2954_6_39
Type:
Location: 41400 - 41837 (+)
Gene ID: HRGMv2_2954_6_40
Type: pfam
Location: 42237 - 43940 (+)
Gene ID: HRGMv2_2954_6_41
Type: TC
Location: 43962 - 52952 (+)
Gene ID: HRGMv2_2954_6_42
Type: STP
Location: 53080 - 53373 (+)
Gene ID: HRGMv2_2954_6_43
Type:
Location: 53708 - 53842 (+)
Gene ID: HRGMv2_2954_6_44
Type: TC
Location: 54163 - 56814 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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