Cluster: HRGMv2_2954_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2954
- CGC Family ID: CGCFAM_10259
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2954_41 | HRGMv2_2954_41_2 | 657 | 2402 | + | 3.A.1.135.5 |
| TC | HRGMv2_2954_41 | HRGMv2_2954_41_3 | 2392 | 4299 | + | 3.A.1.135.5 |
| CAZyme | HRGMv2_2954_41 | HRGMv2_2954_41_4 | 4530 | 6470 | + | GH18 |
| pfam | HRGMv2_2954_41 | HRGMv2_2954_41_5 | 6610 | 7857 | + | Fe_hyd_lg_C |
| TC | HRGMv2_2954_41 | HRGMv2_2954_41_6 | 8166 | 9407 | + | 1.A.11.5.1 |
| pfam | HRGMv2_2954_41 | HRGMv2_2954_41_7 | 9426 | 9800 | + | P-II |
| TC | HRGMv2_2954_41 | HRGMv2_2954_41_8 | 10125 | 11480 | - | 2.A.40.7.6 |
Gene ID: HRGMv2_2954_41_2
Type: TC
Location: 657 - 2402 (+)
Type: TC
Location: 657 - 2402 (+)
Gene ID: HRGMv2_2954_41_3
Type: TC
Location: 2392 - 4299 (+)
Type: TC
Location: 2392 - 4299 (+)
Gene ID: HRGMv2_2954_41_4
Type: CAZyme
Location: 4530 - 6470 (+)
Type: CAZyme
Location: 4530 - 6470 (+)
Gene ID: HRGMv2_2954_41_5
Type: pfam
Location: 6610 - 7857 (+)
Type: pfam
Location: 6610 - 7857 (+)
Gene ID: HRGMv2_2954_41_6
Type: TC
Location: 8166 - 9407 (+)
Type: TC
Location: 8166 - 9407 (+)
Gene ID: HRGMv2_2954_41_7
Type: pfam
Location: 9426 - 9800 (+)
Type: pfam
Location: 9426 - 9800 (+)
Gene ID: HRGMv2_2954_41_8
Type: TC
Location: 10125 - 11480 (-)
Type: TC
Location: 10125 - 11480 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.