Cluster: HRGMv2_2954_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2954
- CGC Family ID: CGCFAM_10258
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2954_37 | HRGMv2_2954_37_1 | 40 | 831 | + | 2.A.5.5.2 |
| pfam | HRGMv2_2954_37 | HRGMv2_2954_37_2 | 881 | 1579 | - | RadC |
| STP | HRGMv2_2954_37 | HRGMv2_2954_37_3 | 1709 | 2290 | - | Pribosyltran |
| CAZyme | HRGMv2_2954_37 | HRGMv2_2954_37_4 | 2931 | 5564 | + | CBM13 | CBM13 |
Gene ID: HRGMv2_2954_37_1
Type: TC
Location: 40 - 831 (+)
Type: TC
Location: 40 - 831 (+)
Gene ID: HRGMv2_2954_37_2
Type: pfam
Location: 881 - 1579 (-)
Type: pfam
Location: 881 - 1579 (-)
Gene ID: HRGMv2_2954_37_3
Type: STP
Location: 1709 - 2290 (-)
Type: STP
Location: 1709 - 2290 (-)
Gene ID: HRGMv2_2954_37_4
Type: CAZyme
Location: 2931 - 5564 (+)
Type: CAZyme
Location: 2931 - 5564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.