Genome Details
Selected Rep_genome_ID: HRGMv2_2906
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS902
Species
UMGS902 sp934467415
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH173_bin.68 | 2,111,363 | 94.41% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2906 | 2,142,400 | 97.09% | 0% | UK | Europe | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_E_1_1719.72 | 2,176,217 | 94.92% | 0% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2906_CGC3 | CGCFAM_00004 | Yes | 11 | 6 | alpha-glucan |
| HRGMv2_2906_CGC12 | CGCFAM_00006 | Yes | 9 | 2 | |
| HRGMv2_2906_CGC6 | CGCFAM_00007 | Yes | 6 | 4 | |
| HRGMv2_2906_CGC11 | CGCFAM_00418 | Yes | 7 | 4 | |
| HRGMv2_2906_CGC16 | CGCFAM_03802 | Yes | 6 | 1 | |
| HRGMv2_2906_CGC13 | CGCFAM_03842 | Yes | 9 | 3 | |
| HRGMv2_2906_CGC5 | CGCFAM_03843 | Yes | 12 | 1 | |
| HRGMv2_2906_CGC1 | CGCFAM_03844 | Yes | 7 | 3 | |
| HRGMv2_2906_CGC8 | CGCFAM_04200 | Yes | 3 | 1 | |
| HRGMv2_2906_CGC14 | CGCFAM_05640 | Yes | 5 | 2 | |
| HRGMv2_2906_CGC7 | CGCFAM_05641 | Yes | 6 | 1 | |
| HRGMv2_2906_CGC17 | CGCFAM_06183 | Yes | 13 | 2 | |
| HRGMv2_2906_CGC19 | CGCFAM_10223 | Yes | 5 | 1 |
Top CAZyme Families