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Cluster: HRGMv2_2906_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2906_17 HRGMv2_2906_17_18 30106 30957 - 3.A.1.1.6
TC HRGMv2_2906_17 HRGMv2_2906_17_19 30971 31957 - 3.A.1.1.7
TC HRGMv2_2906_17 HRGMv2_2906_17_20 32029 33372 - 3.A.1.1.41
NULL(UNKNOWN) HRGMv2_2906_17 HRGMv2_2906_17_21 33954 35171 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2906_17 HRGMv2_2906_17_22 35177 36271 - Epimerase_2
CAZyme HRGMv2_2906_17 HRGMv2_2906_17_23 36377 38995 - GH43_26
TF HRGMv2_2906_17 HRGMv2_2906_17_24 39052 39804 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2906_17 HRGMv2_2906_17_25 39986 41836 + GH146
CAZyme HRGMv2_2906_17 HRGMv2_2906_17_26 41893 43179 - GH18
Gene ID: HRGMv2_2906_17_18
Type: TC
Location: 30106 - 30957 (-)
Gene ID: HRGMv2_2906_17_19
Type: TC
Location: 30971 - 31957 (-)
Gene ID: HRGMv2_2906_17_20
Type: TC
Location: 32029 - 33372 (-)
Gene ID: HRGMv2_2906_17_21
Type:
Location: 33954 - 35171 (-)
Gene ID: HRGMv2_2906_17_22
Type: pfam
Location: 35177 - 36271 (-)
Gene ID: HRGMv2_2906_17_23
Type: CAZyme
Location: 36377 - 38995 (-)
Gene ID: HRGMv2_2906_17_24
Type: TF
Location: 39052 - 39804 (-)
Gene ID: HRGMv2_2906_17_25
Type: CAZyme
Location: 39986 - 41836 (+)
Gene ID: HRGMv2_2906_17_26
Type: CAZyme
Location: 41893 - 43179 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS902
→
Species
UMGS902 sp934467415

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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