Cluster: HRGMv2_2906_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2906
- CGC Family ID: CGCFAM_10223
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2906_46 | HRGMv2_2906_46_8 | 5497 | 6585 | - | 3.A.1.2.7 |
| TC | HRGMv2_2906_46 | HRGMv2_2906_46_9 | 6656 | 7639 | - | 3.A.1.2.1 |
| TC | HRGMv2_2906_46 | HRGMv2_2906_46_10 | 7651 | 9156 | - | 3.A.1.2.3 |
| TF | HRGMv2_2906_46 | HRGMv2_2906_46_11 | 9584 | 10600 | - | LacI |
| CAZyme | HRGMv2_2906_46 | HRGMv2_2906_46_12 | 10801 | 12237 | - | GH43_33 |
Gene ID: HRGMv2_2906_46_8
Type: TC
Location: 5497 - 6585 (-)
Type: TC
Location: 5497 - 6585 (-)
Gene ID: HRGMv2_2906_46_9
Type: TC
Location: 6656 - 7639 (-)
Type: TC
Location: 6656 - 7639 (-)
Gene ID: HRGMv2_2906_46_10
Type: TC
Location: 7651 - 9156 (-)
Type: TC
Location: 7651 - 9156 (-)
Gene ID: HRGMv2_2906_46_11
Type: TF
Location: 9584 - 10600 (-)
Type: TF
Location: 9584 - 10600 (-)
Gene ID: HRGMv2_2906_46_12
Type: CAZyme
Location: 10801 - 12237 (-)
Type: CAZyme
Location: 10801 - 12237 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS902
Species
UMGS902 sp934467415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2906_46_10 | vegetarian > vegan | 1.31031 | 0.00181 |