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Cluster: HRGMv2_2906_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2906_6 HRGMv2_2906_6_61 75161 75793 + 1.A.62.2.1
TC HRGMv2_2906_6 HRGMv2_2906_6_62 75874 77532 - 4.C.1.1.14
STP HRGMv2_2906_6 HRGMv2_2906_6_63 77693 78253 + TetR_N
TC HRGMv2_2906_6 HRGMv2_2906_6_64 78461 79327 - 3.A.1.24.5
TC HRGMv2_2906_6 HRGMv2_2906_6_65 79383 80048 - 3.A.1.24.5
TC HRGMv2_2906_6 HRGMv2_2906_6_66 80038 81045 - 3.A.1.24.2
pfam HRGMv2_2906_6 HRGMv2_2906_6_67 81371 82378 - AsnA
pfam HRGMv2_2906_6 HRGMv2_2906_6_68 82555 82848 + 3HCDH_N | NAD_binding_2
TC HRGMv2_2906_6 HRGMv2_2906_6_69 82953 84581 - 9.A.8.1.7
STP HRGMv2_2906_6 HRGMv2_2906_6_70 84625 84894 - FeoA
pfam HRGMv2_2906_6 HRGMv2_2906_6_71 84995 85825 + Ubie_methyltran | Methyltransf_11 | Methyltransf_25 | Zn_ribbon_RlmA
CAZyme HRGMv2_2906_6 HRGMv2_2906_6_72 85826 86542 + GT2
Gene ID: HRGMv2_2906_6_61
Type: TC
Location: 75161 - 75793 (+)
Gene ID: HRGMv2_2906_6_62
Type: TC
Location: 75874 - 77532 (-)
Gene ID: HRGMv2_2906_6_63
Type: STP
Location: 77693 - 78253 (+)
Gene ID: HRGMv2_2906_6_64
Type: TC
Location: 78461 - 79327 (-)
Gene ID: HRGMv2_2906_6_65
Type: TC
Location: 79383 - 80048 (-)
Gene ID: HRGMv2_2906_6_66
Type: TC
Location: 80038 - 81045 (-)
Gene ID: HRGMv2_2906_6_67
Type: pfam
Location: 81371 - 82378 (-)
Gene ID: HRGMv2_2906_6_68
Type: pfam
Location: 82555 - 82848 (+)
Gene ID: HRGMv2_2906_6_69
Type: TC
Location: 82953 - 84581 (-)
Gene ID: HRGMv2_2906_6_70
Type: STP
Location: 84625 - 84894 (-)
Gene ID: HRGMv2_2906_6_71
Type: pfam
Location: 84995 - 85825 (+)
Gene ID: HRGMv2_2906_6_72
Type: CAZyme
Location: 85826 - 86542 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS902
→
Species
UMGS902 sp934467415

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2906_6_61 vegetarian > omnivore 1.29141 0.03377
HRGMv2_2906_6_61 vegetarian > vegan 1.12607 0.00181

🧭 Explore Read Mapping of CGC

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