Cluster: HRGMv2_2906_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2906
- CGC Family ID: CGCFAM_05640
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2906_18 | HRGMv2_2906_18_2 | 1124 | 2845 | + | 3.A.1.135.7 |
| TC | HRGMv2_2906_18 | HRGMv2_2906_18_3 | 2829 | 4577 | + | 3.A.1.135.5 |
| pfam | HRGMv2_2906_18 | HRGMv2_2906_18_4 | 4591 | 5274 | + | PNP_UDP_1 |
| CAZyme | HRGMv2_2906_18 | HRGMv2_2906_18_5 | 5321 | 6355 | - | GH43_26 |
| CAZyme | HRGMv2_2906_18 | HRGMv2_2906_18_6 | 6380 | 9661 | - | GH43_26 |
Gene ID: HRGMv2_2906_18_2
Type: TC
Location: 1124 - 2845 (+)
Type: TC
Location: 1124 - 2845 (+)
Gene ID: HRGMv2_2906_18_3
Type: TC
Location: 2829 - 4577 (+)
Type: TC
Location: 2829 - 4577 (+)
Gene ID: HRGMv2_2906_18_4
Type: pfam
Location: 4591 - 5274 (+)
Type: pfam
Location: 4591 - 5274 (+)
Gene ID: HRGMv2_2906_18_5
Type: CAZyme
Location: 5321 - 6355 (-)
Type: CAZyme
Location: 5321 - 6355 (-)
Gene ID: HRGMv2_2906_18_6
Type: CAZyme
Location: 6380 - 9661 (-)
Type: CAZyme
Location: 6380 - 9661 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS902
Species
UMGS902 sp934467415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.