Cluster: HRGMv2_2906_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2906
- CGC Family ID: CGCFAM_03802
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2906_27 | HRGMv2_2906_27_8 | 11944 | 12822 | + | 3.A.1.4.10 |
| TC | HRGMv2_2906_27 | HRGMv2_2906_27_9 | 12837 | 13934 | + | 3.A.1.4.8 |
| TC | HRGMv2_2906_27 | HRGMv2_2906_27_10 | 13931 | 14770 | + | 3.A.1.4.10 |
| TC | HRGMv2_2906_27 | HRGMv2_2906_27_11 | 14763 | 15488 | + | 3.A.1.4.10 |
| pfam | HRGMv2_2906_27 | HRGMv2_2906_27_12 | 15861 | 16289 | - | DZR |
| CAZyme | HRGMv2_2906_27 | HRGMv2_2906_27_13 | 16391 | 17788 | - | AA7 |
Gene ID: HRGMv2_2906_27_8
Type: TC
Location: 11944 - 12822 (+)
Type: TC
Location: 11944 - 12822 (+)
Gene ID: HRGMv2_2906_27_9
Type: TC
Location: 12837 - 13934 (+)
Type: TC
Location: 12837 - 13934 (+)
Gene ID: HRGMv2_2906_27_10
Type: TC
Location: 13931 - 14770 (+)
Type: TC
Location: 13931 - 14770 (+)
Gene ID: HRGMv2_2906_27_11
Type: TC
Location: 14763 - 15488 (+)
Type: TC
Location: 14763 - 15488 (+)
Gene ID: HRGMv2_2906_27_12
Type: pfam
Location: 15861 - 16289 (-)
Type: pfam
Location: 15861 - 16289 (-)
Gene ID: HRGMv2_2906_27_13
Type: CAZyme
Location: 16391 - 17788 (-)
Type: CAZyme
Location: 16391 - 17788 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS902
Species
UMGS902 sp934467415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2906_27_12 | vegetarian > omnivore | 3.08430 | 0.03377 |
| HRGMv2_2906_27_12 | vegetarian > vegan | 3.71312 | 0.00181 |