Genome Details
Selected Rep_genome_ID: HRGMv2_2871
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1623
Species
UMGS1623 sp934647945
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG397_13 | 2,785,357 | 96.64% | 3.02% | NA | Africa | H3AfricaPhase2 |
| CGMR060084 | 2,683,848 | 98.66% | 1.68% | China | Asia | CGMR |
| HRGMv2_2871 | 2,562,648 | 96.29% | 0.671% | South Korea | Asia | HRGM |
| REFINED_METABAT215_SUBJECT_CONTIGS_1500_ASSEMBLY_K77_MERGED__Pilot_MoBio_Fiber_I_11_1003.322 | 2,703,084 | 98.39% | 1.68% | NA | Africa | Hadza |
| Rep_2988 | 2,481,222 | 93.6242% | 1.00671% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2871_CGC16 | CGCFAM_00009 | Yes | 3 | 1 | |
| HRGMv2_2871_CGC1 | CGCFAM_00155 | Yes | 10 | 1 | |
| HRGMv2_2871_CGC3 | CGCFAM_00155 | Yes | 10 | 2 | |
| HRGMv2_2871_CGC15 | CGCFAM_00918 | Yes | 7 | 1 | |
| HRGMv2_2871_CGC10 | CGCFAM_00976 | Yes | 5 | 1 | |
| HRGMv2_2871_CGC4 | CGCFAM_02053 | Yes | 3 | 1 | |
| HRGMv2_2871_CGC11 | CGCFAM_02828 | Yes | 8 | 4 | |
| HRGMv2_2871_CGC6 | CGCFAM_04218 | Yes | 9 | 3 | |
| HRGMv2_2871_CGC9 | CGCFAM_05673 | Yes | 5 | 1 | |
| HRGMv2_2871_CGC8 | CGCFAM_09053 | Yes | 9 | 2 | |
| HRGMv2_2871_CGC7 | CGCFAM_09054 | Yes | 13 | 4 | |
| HRGMv2_2871_CGC13 | CGCFAM_10203 | Yes | 23 | 6 |
Top CAZyme Families