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Cluster: HRGMv2_2871_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2871_2 HRGMv2_2871_2_9 9664 11568 - GH163
STP HRGMv2_2871_2 HRGMv2_2871_2_10 11596 12897 - SBP_bac_1
TC HRGMv2_2871_2 HRGMv2_2871_2_11 12947 13969 - 3.A.1.1.11
NULL(UNKNOWN) HRGMv2_2871_2 HRGMv2_2871_2_12 14060 15607 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2871_2 HRGMv2_2871_2_13 15682 16749 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2871_2 HRGMv2_2871_2_14 16823 17737 - 3.A.1.1.25
pfam HRGMv2_2871_2 HRGMv2_2871_2_15 17734 19950 - DUF5696
pfam HRGMv2_2871_2 HRGMv2_2871_2_16 19964 22021 - Yip1
TC HRGMv2_2871_2 HRGMv2_2871_2_17 22111 22953 - 3.A.1.1.39
TC HRGMv2_2871_2 HRGMv2_2871_2_18 22976 23908 - 3.A.1.1.11
Gene ID: HRGMv2_2871_2_9
Type: CAZyme
Location: 9664 - 11568 (-)
Gene ID: HRGMv2_2871_2_10
Type: STP
Location: 11596 - 12897 (-)
Gene ID: HRGMv2_2871_2_11
Type: TC
Location: 12947 - 13969 (-)
Gene ID: HRGMv2_2871_2_12
Type:
Location: 14060 - 15607 (-)
Gene ID: HRGMv2_2871_2_13
Type:
Location: 15682 - 16749 (-)
Gene ID: HRGMv2_2871_2_14
Type: TC
Location: 16823 - 17737 (-)
Gene ID: HRGMv2_2871_2_15
Type: pfam
Location: 17734 - 19950 (-)
Gene ID: HRGMv2_2871_2_16
Type: pfam
Location: 19964 - 22021 (-)
Gene ID: HRGMv2_2871_2_17
Type: TC
Location: 22111 - 22953 (-)
Gene ID: HRGMv2_2871_2_18
Type: TC
Location: 22976 - 23908 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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